WEP - Architecture: WEP: Whole Exome Pipeline

Analysis service closed

We inform users that due to the obsolescence of the analysis workflow this service will be no longer available starting from now.

This workflow is now replaced and improved by The Consensus Variant Calling System (COVACS). You are allowed to access COVACS by using the same credentials of WEP.

If you are still interested in using WEP, please contact us at the following email address: superc@cineca.it

Scheduled Maintenance

Due to a cluster migration analyses submission is temporarly disabled.
We will back online as soon as possible

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Architecture

Submission architecture

The WES tool provides a frontend to a complex variant discovery pipeline.
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Pipeline workflow

The WES pipeline workflow uses a cocktail of different tools/technologies in different steps.
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WEP - Bioinformatic Staff@CINECA (P.I. 00502591209: read about privacy)